2013

  • Alizadeh, H., Behboudi, K., Amadzadeh, M., Javan-Nikkhah, M., Zamioudis, C., Pieterse, C.M.J. and Bakker, P.A.H.M. (2013). Induced systemic resistance in cucumber and Arabidopsis thaliana by the combination of Trichoderma harzianumTr6 and Pseudomonas sp. Ps14. Biological Control 65: 14-23 (pdf).
  • Bakker, P.A.H.M., Berendsen, R.L., Doornbos, R.F., Wintermans, P.C.A. and Pieterse, C.M.J. (2013). The rhizospere revisited: root microbiomics. Frontiers in Plant Science 4: 165 (pdf).
  • Bakker, P.A.H.M., Doornbos, R.F., Zamioudis, C., Berendsen, R.L. and Pieterse (2013). Induced systemic resistance and the rhizosphere microbiome. Plant Pathology Journal 29: 136-143 (pdf).
  • Bartels, S., Lori, M., Mbengue, M., Van Verk, M., Klauser, D., Hander, T., Boni, R., Robatzek, S. and Boller, T. (2013). The family of AtPeps and their precursors in Arabidopsis: Differential expression and localization but similar induction of pattern-triggered immune responses. Journal of Experimental Botany 64: 5309–5321.
  • Berendsen, R.L., Kalkhove, S.I.C., Lugones, L.G., Baars, J.J.P.,  Wösten, H.A.B.and Bakker, P.A.H.M. (2013). Effects of the mushroom-volatile 1-octen-3-ol on dry bubble disease. Applied Microbiology and Biotechnology 97: 5535-5543 (pdf).
  • Berendsen, R.L., Schrier, N., Kalkhove, S.I.C., Lugones, L.G., Baars, J.P., Zijlstra, C., De Weerdt, M., Wösten, H.A.B. and Bakker, P.A.H.M. (2013). Absence of induced resistance in Agaricus bisporus against Lecanicillium fungicola. Antonie van Leeuwenhoek Int. J. G. 103: 539–550 (pdf).
  • Cameron, D.D., Neal, A., Van Wees, S.C.M. and Ton, J. (2013). Mycorrhiza-induced resistance: more than the sum of its parts? Trends in Plant Science 18: 539-545 (pdf).
  • De Wit, M., Spoel, S.H., Sanchez-Perez, G.F., Gommers, C.M.M., Pieterse, C.M.J., Voesenek, L.A.C.J. and Pierik, R. (2013). Perception of low Red:Far-red ratio compromises both salicylic acid- and jasmonic acid-dependent pathogen defences in Arabidopsis. Plant Journal 75: 90-103 (pdf).
  • Giron, D., Frago, E., Glevarec, G., Pieterse, C.M.J. and Dicke, M. (2013). Cytokinins as key regulators in plant–microbe–insect interactions: connecting plant growth and defence. Functional Ecology 27: 599-609 (pdf).
  • Huibers, R.P., Loonen, A.E.H.M., Gao, D., Van den Ackerveken, G., Visser, R.G.F. and Bai, Y. (2013) Powdery mildew resistance in tomato by impairment of SlPMR4 and SlDMR1. PLoS ONE 8: e67467.
  • Jiang, R.Y.H., de Bruijn, I., Haas, B.J., Belmonte, R., Löbach, L., Christie, J., Van den Ackerveken, G., Bottin, A., Bulone, V., Díaz-Moreno, S.M., Dumas, B., Fan,L., Gaulin, E., Govers, F., Grenville-Briggs, L.J., Horner, N.R., Levin, J.Z., Mammella, M., Meijer, H.J., Morris, P., Nusbaum, C., Oome, S., Phillips, A.J., Van Rooyen, D., Rzeszutek, E., Saraiva, M., Secombes, C.J., Seidl, M.F., Snel, B., Stassen, J.H., Sykes, S., Tripathy, S., van den Berg, H., Vega-Arreguin, J.C., Wawra, S., Young, S.K., Zeng, Q., Dieguez-Uribeondo, J., Russ, C., Tyler, B.M. and Van West, P. (2013). Distinctive expansions of the potential virulence genes in the genome of the oomycete fish pathogen Saprolegnia parasitica. PLoS Genetics 9: e1003272 (pdf).
  • Kuramae, E.E., Verbruggen, E., Hillekens, R., De Hollander, M., Roling, W.F.M., Van der Heijden, M.G.A. and Kowalchuk, G.A. (2013). Tracking fungal community responses to maize plants by DNA- and RNA-based pyrosequencing. PLoS ONE 8: e69973.
  • Kuramae, E.E., Hillekens, R.H.E., De Hollander, M., Van der Heijden, M.G.A., Van den Berg, M., Van Straalen, N.M. and Kowalchuk, G.A. (2013). Structural and functional variation in soil fungal communities associated with litter bags containing maize leaf. FEMS Microbiology Ecology 84: 519-531.
  • Lapin, D. (2013). Molecular aspects of plant disease susceptibility: Arabidopsis genes affecting downy mildew infection. pp. 1-145, Ph.D. Thesis Utrecht University.
  • Lapin, D. and Van den Ackerveken, G. (2013) Susceptibility to plant disease: more than a failure of host immunity. Trends in Plant Science 18: 546-554 (pdf).
  • Mithoe, S. (2013). Modulation of MAPK signaling in plant immunity and development. pp. 1-159, Ph.D. Thesis Utrecht University.
  • Oome, S. (2013). Comparative and functional analysis of secreted proteins of the oomycete Hyaloperonospora arabidopsidis. pp. 1-176, Ph.D. Thesis Utrecht University.
  • Pangesti, N., Pineda, A., Pieterse, C.M.J., Dicke, M. and Van Loon, J.J.A. (2013).Two-way plant mediated interactions between root-associated microbes and insects: from ecology to mechanisms. Frontiers in Plant Science 4: 414 (pdf).  
  • Pel, M.J.C. (2013). Evasion and suppression of plant immunity. pp. 1-161, Ph.D. Thesis Utrecht University.
  • Pel, M.J.C. and Pieterse, C.M.J. (2013). Microbial recognition and evasion of host immunity. Journal of Experimental Botany 64: 1237–1248 (pdf).
  • Perez-Harguindeguy, N., Diaz, S., Garnier, E., Lavorel, S., Poorter, H., Jaureguiberry, P., Bret-Harte, M.S., Cornwell, W.K., Craine, J.M., Gurvich, D.E., Urcelay, C., Veneklaas, E.J., Reich, P.B., Poorter, L., Wright, I.J., Ray, P., Enrico, L., Pausas, J.G., De Vos, A.C., Buchmann, N., Funes, G., Quetier, F., Hodgson, J.G., Thompson, K., Morgan, H.D., Ter Steege, H., Van der Heijden, M.G.A., Sack, L., Blonder, B., Poschlod, P., Vaieretti, M.V., Conti, G. Staver, A.C., Aquino, S. and Cornelissen, J.H.C. (2013). New handbook for standardised measurement of plant functional traits worldwide.  Australian Journal of Botany 61: 167-234.
  • Pieterse, C.M.J., Poelman, E.H., Van Wees, S.C.M. and Dicke, M. (2013). Induced plant responses to microbes and insects. Frontiers in Plant Science 4: 475 (pdf).
  • Pineda, A., Dicke, M., Pieterse, C.M.J. and Pozo, M.J. (2013). Beneficial microbes in a changing environment: are they always helping plants to deal with insects? Functional Ecology 27: 574-586 (pdf).
  • Ponzio, C., Gols, R., Pieterse, C.M.J. and Dicke, M. (2013). Ecological and phytohormonal aspects of plant volatile emission in response to single and dual infestations with herbivores and phytopathogens. Functional Ecology 27: 587-598 (pdf).
  • Rioja, C., Van Wees, S.C.M., Charlton, K.A., Pieterse, C.M.J., Lorenzo, O. and García-Sánchez, S. (2013). Wide screening of phage-displayed libraries identifies immune targets in planta. PLoS ONE 8: e54654 (pdf).
  • Seidl, M.F. (2013). Exploring evolution and biology of oomycetes: integrative and comparative genomics. pp. 1-173, Ph.D. Thesis Utrecht University.
  • Snoek, L.B., Terpstra, I.R., Dekter, R., Van den Ackerveken, G. and Peeters, A.J.M. (2013) Genetical genomics reveals large scale genotype-by-environment interactions in Arabidopsis thaliana. Frontiers in Genetics 3: 317(pdf).
  • Van der Does, D., Leon-Reyes, A., Koornneef, A., Van Verk, M.C., Rodenburg, N., Pauwels, L., Goossens, A., Körbes, A., Memelink, J., Ritsema, T., Van Wees, S.C.M. and Pieterse, C.M.J. (2013). Salicylic acid suppresses jasmonic acid signaling downstream of SCFCOI1-JAZ by targeting GCC promoter motifs via transcription factor ORA59. Plant Cell 25: 744–761 (pdf).
  • Van der Heijden, M.G.A. and Wagg, C. (2013). Soil microbial diversity and agro-ecosystem functioning. Plant and Soil 363: 1-5.
  • Van Verk, M.C., Hickman, R., Pieterse, C.M.J. and Van Wees, S.C.M. (2013). RNA-Seq: revelation of the messengers. Trends in Plant Science 18: 175-179 (pdf).
  • Van Wees, S.C.M., Van Pelt, J.A., Bakker, P.A.H.M. and Pieterse, C.M.J. (2013). Bioassays for assessing jasmonate-dependent defenses triggered by pathogens, herbivorous Insects, or beneficial rhizobacteria. In: Jasmonate Signaling - Methods and Protocols (eds. A. Goossens and Laurens Pauwels). Methods in Molecular Biology 1011: 35-49 (pdf).
  • Veiga, R.S.L., Faccio, A., Genre, A., Pieterse, C.M.J., Bonfante, P. and Van der Heijden, M.G.A. (2013). Arbuscular mycorrhizal fungi reduce growth and infect roots of the non-host plant Arabidopsis thaliana. Plant Cell & Environment 36: 1926-1937 (pdf).
  • Verbruggen, E., Van der Heijden, M.G.A., Rillig, M.C. and Kiers, E.T. (2013). Mycorrhizal fungal establishment in agricultural soils: factors determining inoculation success. New Phytologist 19: 1104-1109.
  • Vos, I.A., Verhage, A., Schuurink, R.C., Watt, L.G., Pieterse, C.M.J. and Van Wees, S.C.M. (2013). Onset of herbivore-induced resistance in systemic tissue primed for jasmonate-dependent defenses is activated by abscisic acid. Frontiers in Plant Science 4: 539 (pdf).
  • Vos, I.A., Pieterse, C.M.J. and Van Wees, S.C.M. (2013). Costs and benefits of hormone-regulated plant defences. Plant Pathology 62: 43-55 (pdf).
  • Zamioudis, C., Mastranesti, P., Dhonukshe, P., Blilou, I. and Pieterse, C.M.J. (2013). Unraveling root developmental programs initiated by beneficial Pseudomonas bacteria. Plant Physiology 162: 304-318 (pdf).