Dr. A.L. (Anna-Lena) Lamprecht

Dr. A.L. (Anna-Lena) Lamprecht


Google Scholar has a rather complete record of my publications, dating back to 2006. See below for research outputs since joining Utrecht University (June 2017).




Scholarly publications

Lamprecht, AL., Palmblad, M., Ison, J., Schwämmle, V., Al Manir, MS., Baker, CJO., Ben Hadj Amor, A., Capella-Gutierrez, S., Charonyktakis, P., Crusoe, MR., Gil, Y., Goble, C., Griffin, TJ., Groth, P., Ienasescu, H., Jagtap, P., Kala?, M., Kasalica, V., Khanteymoori, A., ... Wolstencroft, K. (2021). Perspectives on automated composition of workflows in the life sciences [version 1; peer review: awaiting peer review]. Manuscript submitted for publication. https://doi.org/10.12688/f1000research.54159.1
Kasalica, V., Schwämmle, V., Palmblad, M., Ison, J., & Lamprecht, A-L. (2021). APE in the Wild: Automated Exploration of Proteomics Workflows in the bio.tools Registry. Journal of Proteome Research, 20(4), 2157-2165. https://doi.org/10.1021/acs.jproteome.0c00983
Van Lissa, C. J., Brandmaier, A. M., Brinkman, L., Lamprecht, A-L., Peikert, A., Struiksma, M. E., & Vreede, B. (2021). WORCS: A Workflow for Open Reproducible Code in Science. Data Science, 4(1), 29-49. https://doi.org/10.3233/DS-210031


Scholarly publications

Akhuseyinoglu, K., Barria-Pineda, J., Sosnovsky, S., Lamprecht, A-L., Guerra, J., & Brusilovsky, P. (2020). Exploring Student-Controlled Social Comparison. In C. Alario-Hoyos, M. J. Rodríguez-Triana, M. Scheffel, I. Arnedillo-Sánchez, & S. M. Dennerlein (Eds.), Addressing Global Challenges and Quality Education: 15th European Conference on Technology Enhanced Learning, EC-TEL 2020, Heidelberg, Germany, September 14–18, 2020, Proceedings (pp. 244-258). (Lecture Notes in Computer Science ; Vol. 12315). Springer, Cham. https://doi.org/10.1007/978-3-030-57717-9_18
Kruiger, J. F., Kasalica, V., Meerlo, R., Lamprecht, A. L., Nyamsuren, E., & Scheider, S. (2020). Loose programming of GIS workflows with geo-analytical concepts. Transactions in GIS. https://doi.org/10.1111/TGIS.12692
Sufi, S., Ortiz, C. M., Hof, C., Aerts, P., Klinkenberg, A., Lamprecht, A-L., Sierman, B., Willigen, B. V., Olivier, B., Willing, C., Thiel, C., Leeuwen, C. V., Jones, C., Flach, C. V., Katz, D. S., Hansen, D., Plomp, E., Coen, G., Steptoe, H., ... Moranville, Y. (2020, Jul 1). Report on the Workshop on Sustainable Software Sustainability 2019 (WOSSS19). Zenodo. https://doi.org/10.5281/zenodo.3922155
Kasalica, V., & Lamprecht, A. L. (2020). Workflow Discovery with Semantic Constraints: The SAT-Based Implementation of APE. Electronic Communications of the EASST, 78. https://doi.org/10.14279/tuj.eceasst.78.1092.1062
Kasalica, V., & Lamprecht, A. L. (2020). APE: A Command-Line Tool and API for Automated Workflow Composition. In V. V. Krzhizhanovskaya, G. Závodszky, M. H. Lees, J. J. Dongarra, & P. M. A. Sloot (Eds.), Proceedings of the International Conference on Computational Science (ICCS 2020): Computational Science (Vol. VII, pp. 464-476). (Lecture Notes in Computer Science; Vol. 12143). Springer. https://doi.org/10.1007/978-3-030-50436-6_34
Scheider, S., Meerlo, R., Kasalica, V., & Lamprecht, A. L. (2020). Ontology of core concept data types for answering geo-analytical questions. Journal of Spatial Information Science, 2020(20). https://doi.org/10.5311/JOSIS.2020.20.555


Scholarly publications

Margaria, T., & Lamprecht, A-L. (2019). Modeling of Games and Game Strategies. In A. Tatnall (Ed.), Encyclopedia of education and information technologies Springer International Publishing. https://doi.org/10.1007/978-3-319-60013-0_209-1
Lamprecht, A-L., Garcia, L., Kuzak, M., Martinez, C., Arcila, R., Martin Del Pico, E., Dominguez Del Angel, V., van de Sandt, S., Ison, J., Martinez, P. A., McQuilton, P., Valencia, A., Harrow, J., Psomopoulos, F., Gelpi, J. L., Chue Hong, N., Goble, C., & Capella-Gutierrez, S. (2019). Towards FAIR principles for research software. EPJ Data Science, Preprint(Preprint), 1-23. https://doi.org/10.3233/DS-190026
Erdmann, C., Simons, N., Otsuji, R., Labou, S., Johnson, R., Castelao, G., Boas, B. V., Lamprecht, A-L., Ortiz, C. M., Garcia, L., Kuzak, M., Martinez, P. A., Stokes, L., Honeyman, T., Wise, S., Quan, J., Peterson, S., Neeser, A., Karvovskaya, L., ... Dennis, T. (2019, Feb 1). Top 10 FAIR Data Software Things. Zenodo. https://doi.org/10.5281/zenodo.2555498
Ison, J., Ménager, H., Brancotte, B., Jaaniso, E., Salumets, A., Raček, T., Lamprecht, A-L., Palmblad, M., Kalaš, M., Chmura, P., Hancock, J. M., Schwämmle, V., & Ienasescu, H-I. (2019). Community curation of bioinformatics software and data resources. Briefings in Bioinformatics. https://doi.org/10.1093/bib/bbz075
Lamprecht, A-L., & Margaria, T. (2019). Modeling of Scientific Workflows. In A. Tatnall (Ed.), Encyclopedia of education and information technologies (pp. 1-8). Springer. https://doi.org/10.1007/978-3-319-60013-0_210-1
Kasalica, V., & Lamprecht, A-L. (2019). Workflow Discovery Through Semantic Constraints: A Geovisualization Case Study. In S. Misra, O. Gervasi, B. Murgante, E. Stankova, V. Korkhov, C. Torre, A. M. A. C. Rocha, D. Taniar, B. O. Apduhan, & E. Tarantino (Eds.), Computational Science and Its Applications -- ICCSA 2019: 19th International Conference, Saint Petersburg, Russia, July 1-4, 2019, Proceedings (pp. 473-488). (Lecture Notes in Computer Science; Vol. 11621). Springer. https://doi.org/10.1007/978-3-030-24302-9_34
Lamprecht, A. L. (2019). Computational Thinking and Programming with Python for Aspiring Data Scientists. Abstract from 19th International Conference of Computational Science - Workshop on Teaching Computational Science, Faro, Portugal. https://www.iccs-meeting.org/iccs2019/wp-content/schedule/pages/WTCS1.html#abstract253
Palmblad, M., Lamprecht, A. L., Ison, J., & Schwämmle, V. (2019). Automated workflow composition in mass spectrometry based proteomics. Bioinformatics, 35(4), 656-664. https://doi.org/10.1093/bioinformatics/bty646


Scholarly publications

Lamprecht, A. L., Palmblad, M., Ison, J., & Schwämmle, V. (2018). Automated Composition of Scientific Workflows in Mass Spectrometry-Based Proteomics. Poster session presented at IEEE eScience 2018, Amsterdam, Netherlands. https://doi.org/10.1109/eScience.2018.00098
Kasalica, V., & Lamprecht, A. L. (2018). Automated Composition of Scientific Workflows: A Case Study on Geographic Data Manipulation. Poster session presented at IEEE eScience 2018, Amsterdam, Netherlands. https://doi.org/10.1109/eScience.2018.00099
Margaria, T., Lamprecht, A. L., & Steffen, B. (2018). Continuous Model-Driven Engineering. In M. Hinchey (Ed.), Software Technology: 10 Years of Innovation in IEEE Computer Wiley.
Wickert, A., Lamprecht, A. L., & Margaria, T. (2018). Domain-specific Design of Patient Classification in Cancer-Related Cachexia Research. In Proceedings of the 6th Conference on Formal Methods in Software Engineering, FormaliSE 2018, collocated with ICSE 2018, Gothenburg, Sweden, June 2, 2018. (pp. 60-63). ACM. https://doi.org/10.1145/3193992.3194002
Gossen, F., Kühn, D., Margaria, T., & Lamprecht, A. L. (2018). Computational Thinking: Learning by Doing with the Cinco Adventure Game Tool. In Proceedings of the 42nd IEEE International Conference on Computers, Software and Applications https://doi.org/10.1109/COMPSAC.2018.00175
McInerney, C., Lamprecht, A. L., & Margaria, T. (2018). Computing Camps for Girls: A First-Time Experience at the University of Limerick. In A. Tatnall, & M. Webb (Eds.), Tomorrow’s Learning: Involving Everyone: Learning with and about technologies and computing (pp. 494-505). (IFIP Advances in Information and Communication Technology; Vol. 515). Springer. https://doi.org/10.1007/978-3-319-74310-3_50
Maglyas, A., & Lamprecht, A. L. (2018). Introduction to the special issue on “Software Business”. Journal of Systems and Software, 135, 105-106. https://doi.org/10.1016/j.jss.2017.10.003

Professional publications

Bouquin, D. (Author), Ball, C. (Author), Lamprecht, A. L. (Author), Jones, C. (Author), & Skluzacek, T. J. (Author). (2018). Abandon hope, we are archiving things we can’t use: considerations for documenting complex objects. Web publication/site, Software Sustainability Institute. https://software.ac.uk/blog/2018-11-29-abandon-hope-we-are-archiving-things-we-cant-use-considerations-documenting-complex


Other output

McInerney, C., Lamprecht, A. L., & Margaria, T. (2017). Computing Camps for Girls: A First-Time Experience at the University of Limerick. Abstract from 2017 World Conference on Computers in Education, Dublin, Ireland.
Lamprecht, A. L. (2017). Bridging Gaps with Scientific Workflows: Experiences from an Interdisciplinary Project Course. Abstract from 17th International Conference on Computational Science , Zürich, Switzerland.