Publicaties
2021
Wetenschappelijke publicaties
Salo-Ahen, O. M. H., Alanko, I., Bhadane, R., Alexandre, A. M., Honorato, R. V., Hossain, S., Juffer, A. H., Kabedev, A., Lahtela-Kakkonen, M., Larsen, A. S., Lescrinier, E., Marimuthu, P., Mirza, M. U., Mustafa, G., Nunes-Alves, A., Pantsar, T., Saadabadi, A., Singaravelu, K., & Vanmeert, M. (2021). Molecular dynamics simulations in drug discovery and pharmaceutical development. Processes, 9(1), 1-60. [71]. https://doi.org/10.3390/pr9010071
van Noort, C. W., Honorato, R. V., & Bonvin, A. M. J. J. (2021). Information-driven modeling of biomolecular complexes. Current Opinion in Structural Biology, 70, 70-77. https://doi.org/10.1016/j.sbi.2021.05.003
Honorato, R. V., Koukos, P. I., Jiménez-García, B., Tsaregorodtsev, A., Verlato, M., Giachetti, A., Rosato, A., & Bonvin, A. M. J. J. (2021). Structural Biology in the Clouds: The WeNMR-EOSC Ecosystem. Frontiers in Molecular Biosciences, 8, 1-7. [729513]. https://doi.org/10.3389/fmolb.2021.729513
Lensink, M. F., Brysbaert, G., Mauri, T., Nadzirin, N., Velankar, S., Chaleil, R. A. G., Clarence, T., Bates, P. A., Kong, R., Liu, B., Yang, G., Liu, M., Shi, H., Lu, X., Chang, S., Roy, R. S., Quadir, F., Liu, J., Cheng, J., ... Wodak, S. J. (2021). Prediction of protein assemblies, the next frontier: The CASP14-CAPRI experiment. Proteins: Structure, Function and Bioinformatics, 89(12), 1800-1823. https://doi.org/10.1002/prot.26222
2020
Wetenschappelijke publicaties
Teles, K., Fernandes, V., Silva, I., Leite, M., Grisolia, C., Lobbia, V. R., van Ingen, H., Honorato, R., Lopes-de-Oliveira, P., Treptow, W., & Santos, G. (2020). Nucleosome binding peptide presents laudable biophysical and in vivo effects. Biomedicine and Pharmacotherapy, 121, [109678]. https://doi.org/10.1016/j.biopha.2019.109678
Koukos, P. I., Roel-Touris, J., Ambrosetti, F., Geng, C., Schaarschmidt, J., Trellet, M. E., Melquiond, A. S. J., Xue, L. C., Honorato, R. V., Moreira, I., Kurkcuoglu, Z., Vangone, A., & Bonvin, A. M. J. J. (2020). An overview of data-driven HADDOCK strategies in CAPRI rounds 38-45. Proteins: Structure, Function and Genetics. https://doi.org/10.1002/prot.25869
2019
Wetenschappelijke publicaties
Honorato, R. V., Roel-Touris, J., & Bonvin, A. M. J. J. (2019). MARTINI-Based Protein-DNA Coarse-Grained HADDOCKing. Frontiers in Molecular Biosciences, 6. https://doi.org/10.3389/fmolb.2019.00102
Roel-Touris, J., Don, C. G., V. Honorato, R., Rodrigues, J. P. G. L. M., & Bonvin, A. M. J. J. (2019). Less Is More: Coarse-Grained Integrative Modeling of Large Biomolecular Assemblies with HADDOCK. Journal of Chemical Theory and Computation, 15, 6358−6367. https://doi.org/10.1021/acs.jctc.9b00310