dr. M.C.J. (Martin) Bootsma
M.C.J.Bootsma@uu.nl
Gegenereerd op 2018-09-21 12:00:05


Alle publicaties
  2018 - Wetenschappelijke publicaties
Kluytmans-van den Bergh, Marjolein F Q, van Mens, Suzan P., Haverkate, Manon R, Bootsma, Martin C.J., Kluytmans, Jan A J W, Bonten, Marc J M, , & , (2018). Quantifying Hospital-Acquired Carriage of Extended-Spectrum Beta-Lactamase-Producing Enterobacteriaceae Among Patients in Dutch Hospitals. Infection Control and Hospital Epidemiology, 39 (1), (pp. 32-39) (8 p.).
  2017 - Wetenschappelijke publicaties
Matamoros, Sébastien, van Hattem, Jarne M, Arcilla, Maris S, Willemse, Niels, Melles, Damian C, Penders, John, Vinh, Trung Nguyen, Thi Hoa, Ngo, Bootsma, Martin C.J., van Genderen, Perry J J, Goorhuis, Abraham, Grobusch, Martin P, Molhoek, Nicky, Oude Lashof, Astrid M.L., Stobberingh, Ellen E, Verbrugh, Henri A, De Jong, Menno D. & Schultsz, Constance (01-12-2017). Global phylogenetic analysis of Escherichia coli and plasmids carrying the mcr-1 gene indicates bacterial diversity but plasmid restriction. Scientific Reports, 7 (1) (10 p.).
Arcilla, Maris S, van Hattem, Jarne M, Haverkate, Manon R, Bootsma, Martin C J, van Genderen, Perry J J, Goorhuis, Abraham, Grobusch, Martin P, Lashof, Astrid M Oude, Molhoek, Nicky, Schultsz, Constance, Stobberingh, Ellen E, Verbrugh, Henri A, de Jong, Menno D, Melles, Damian C & Penders, John (2017). Import and spread of extended-spectrum β-lactamase-producing Enterobacteriaceae by international travellers (COMBAT study) - a prospective, multicentre cohort study. The Lancet Infectious Diseases, 17 (1), (pp. 78-85) (8 p.). Copyright © 2017 Elsevier Ltd. All rights reserved..
Haverkate, M R, Platteel, T N, Fluit, A C, Cohen Stuart, J W, Leverstein-van Hall, M A, Thijsen, S F T, Scharringa, J, Kloosterman, R C, Bonten, M J M & Bootsma, M C J (2017). Quantifying within-household transmission of extended-spectrum β-lactamase-producing bacteria. Clinical Microbiology and Infection, 23 (1), (pp. 46.e1-46.e7). Copyright © 2016 European Society of Clinical Microbiology and Infectious Diseases. Published by Elsevier Ltd. All rights reserved..
Gurieva, Tanya, Dautzenberg, Mirjam J D, Gniadkowski, Marek, Derde, Lennie P G, Bonten, Marc J M & Bootsma, Martin C J (2017). The transmissibility of antibiotic-resistant Enterobacteriaceae in Intensive Care Units. Clinical Infectious Diseases, 66 (4), (pp. 489-493) (5 p.).
van Hattem, Jarne M, Arcilla, Maris S, Grobusch, Martin P, Bart, Aldert, Bootsma, Martin C., van Genderen, Perry J J, van Gool, Tom, Goorhuis, Abraham, van Hellemond, Jaap J., Molenkamp, Richard, Molhoek, Nicky, Oude Lashof, Astrid Ml, Stobberingh, Ellen E, de Wever, Bob, Verbrugh, Henri A, Melles, Damian C, Penders, John, Schultsz, Constance & de Jong, Menno D. (01-09-2017). Travel-related acquisition of diarrhoeagenic bacteria, enteral viruses and parasites in a prospective cohort of 98 Dutch travellers. Travel Medicine and Infectious Disease, 19, (pp. 33-36) (4 p.).
  2016 - Wetenschappelijke publicaties
Haverkate, Manon R, Weiner, Shayna, Lolans, Karen, Moore, Nicholas M, Weinstein, Robert A, Bonten, Marc J M, Hayden, Mary K & Bootsma, Martin C J (2016). Duration of Colonization With Klebsiella pneumoniae Carbapenemase-Producing Bacteria at Long-Term Acute Care Hospitals in Chicago, Illinois. Open Forum Infectious Diseases, 3 (4).
Dautzenberg, M J D, Haverkate, M R, Bonten, M J M & Bootsma, M C J (2016). Epidemic potential of Escherichia coli ST131 and Klebsiella pneumoniae ST258 - a systematic review and meta-analysis. BMJ Open, 6 (3). Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://www.bmj.com/company/products-services/rights-and-licensing/.
Hetem, David J, Bootsma, Martin C J & Bonten, Marc J M (01-03-2016). Prevention of Surgical Site Infections - Decontamination With Mupirocin Based on Preoperative Screening for Staphylococcus aureus Carriers or Universal Decontamination?. Clinical Infectious Diseases, 62 (5), (pp. 631-636) (6 p.). © The Author 2015. Published by Oxford University Press for the Infectious Diseases Society of America. All rights reserved. For permissions, e-mail journals.permissions@oup.com..
van Hattem, Jarne M, Arcilla, Maris S, Bootsma, Martin Cj, van Genderen, Perry J, Goorhuis, Abraham, Grobusch, Martin P, Molhoek, Nicky, Oude Lashof, Astrid Ml, Schultsz, Constance, Stobberingh, Ellen E, Verbrugh, Henri A, de Jong, Menno D, Melles, Damian C & Penders, John (2016). Prolonged carriage and potential onward transmission of carbapenemase-producing Enterobacteriaceae in Dutch travelers. Future Microbiology, 11, (pp. 857-64) (8 p.).
Overdevest, Ilse, Haverkate, Manon, Veenemans, Jacobien, Hendriks, Yvonne, Verhulst, Carlo, Mulders, Ans, Couprie, Willemijn, Bootsma, Martin, Johnson, James & Kluytmans, Jan (20-10-2016). Prolonged colonisation with Escherichia coli O25:ST131 versus other extended-spectrum beta-lactamase-producing E. coli in a long-term care facility with high endemic level of rectal colonisation, the Netherlands, 2013 to 2014. Eurosurveillance, 21 (42). This article is copyright of The Authors, 2016..
Hetem, David J, Bootsma, Martin C J & Bonten, Marc J M (01-06-2016). Reply to Leenders. Clinical Infectious Diseases, 62 (11) (1 p.).
  2015 - Wetenschappelijke publicaties
Haverkate, Manon R, Bootsma, Martin C J, Weiner, Shayna, Blom, Donald, Lin, Michael Y, Lolans, Karen, Moore, Nicholas M, Lyles, Rosie D, Weinstein, Robert A, Bonten, Marc J M & Hayden, Mary K (2015). Modeling spread of KPC-producing bacteria in long-term acute care hospitals in the Chicago region, USA. Infection Control and Hospital Epidemiology, 36 (10), (pp. 1148-54) (7 p.).
Haverkate, Manon R, Dautzenberg, Mirjam J D, Ossewaarde, Tjaco J M, van der Zee, Anneke, den Hollander, Jan G, Troelstra, Annet, Bonten, Marc J M & Bootsma, Martin C J (2015). Within-Host and Population Transmission of blaOXA-48 in K. pneumoniae and E. coli. PLoS One, 10 (10), (pp. e0140960).
  2014 - Wetenschappelijke publicaties
Haverkate, Manon R, Derde, Lennie P G, Brun-Buisson, Christian, Bonten, Marc J M & Bootsma, Martin C J (2014). Duration of colonization with antimicrobial-resistant bacteria after ICU discharge. Intensive Care Medicine, 40 (4), (pp. 564-571) (8 p.).
Vink, Margaretha Annelie, Wallinga, Jacco & Bootsma, Martinus Christoffel Jozef (01-11-2014). Serial intervals of respiratory infectious diseases - a systematic review and analysis. American Journal of Epidemiology, 180 (9), (pp. 865-875) (11 p.).
van Bunnik, Bram A D, Ssematimba, Amos, Hagenaars, Thomas J, Nodelijk, Gonnie, Haverkate, Manon R, Bonten, Marc J M, Hayden, Mary K, Weinstein, Robert A, De Jong, Mart C M & Bootsma, Martin C J (2014). Small distances can keep bacteria at bay for days. Proceedings of the National Academy of Sciences of the United States of America, 111 (9), (pp. 3556-3560) (5 p.).
Arcilla, Maris S, van Hattem, Jarne M, van Genderen, Perry J, Goorhuis, Abraham, Schultsz, Constance, Stobberingh, Ellen E, Verbrugh, Henri A, de Jong, Menno D, Melles, Damian C, Penders, John & Bootsma, Martin C J (2014). The Carriage Of Multiresistant Bacteria After Travel (COMBAT) prospective cohort study - methodology and design. BMC Public Health, 14 (8 p.).
Melsen, W G, Rovers, M M, Bonten, M J M & Bootsma, M C J (2014). The effects of clinical and statistical heterogeneity on the predictive values of results from meta-analyses. Clinical Microbiology and Infection, 20 (2), (pp. 123-129) (7 p.).
  2013 - Wetenschappelijke publicaties
Gurieva, T., Bootsma, M.C.J. & Bonten, M.J.M. (2013). Cost and effects of different admission screening strategies to control the spread of methicillin-resistant Staphylococcus aureus. PLoS Computational Biology, 9 (2), (pp. e1002874) (11 p.). http://www.ncbi.nlm.nih.gov/pubmed/23436984 39th IEEE Photovoltaic Specialists Conference.
Schultsz, C., Bootsma, M.C.J., Loan, H.T., Nga, T.T., le Thao, T.P., Thuy, T.T., Campbell, J., le Vien, M., Hoa, N.T., Hoang, N.V., Wit, F., Chau, N.V., Farrar, J., Bonten, M.J.M. & Yen, L.M. (2013). Effects of infection control measures on acquisition of five antimicrobial drug-resistant microorganisms in a tetanus intensive care unit in Vietnam. Intensive Care Medicine, 39 (4), (pp. 661-671) (11 p.). http://www.ncbi.nlm.nih.gov/pubmed/23306583.
Hetem, D.J., Bootsma, M.C.J., Troelstra, A. & Bonten, M.J.M. (2013). Transmissibility of Livestock-associated Methicillin-Resistant Staphylococcus aureus. Emerging Infectious Diseases, 19 (11), (pp. 1797-1802) (6 p.). http://www.ncbi.nlm.nih.gov/pubmed/24207050.
Bootsma, M.C. & Bonten, M.J.M. (2013). Unraveling the dynamics of community-associated methicillin-resistant Staphylococcus aureus. Clinical Infectious Diseases, 56 (8), (pp. 1075-1077) (3 p.). http://www.ncbi.nlm.nih.gov/pubmed/23325427.
  2012 - Wetenschappelijke publicaties
Gurieva, T., Bootsma, M.C. & Bonten, M.J.M. (2012). Decolonization of patients and health care workers to control nosocomial spread of methicillin-resistant Staphylococcus aureus: a simulation study. BMC Infectious Diseases, 12, (pp. 302/1-302/9) (9 p.).
Haverkate, M.R., Derde, L.P.G., Brun-Buisson, C., Bonten, M.J.M. & Bootsma, M.C.J. (01-04-2012). Duration of colonisation with antimicrobial-resistant bacteria after ICU discharge. Clinical Microbiology and Infection, 18, (pp. 15) (1 p.).
Bootsma, M C J, van der Horst, M A, Guryeva, T, ter Kuile, B H & Diekmann, O (2012). Modeling non-inherited antibiotic resistance. Bulletin of Mathematical Biology, 74 (8), (pp. 1691-1705) (15 p.).
Hetem, D.J., Westh, H., Boye, K., Jarlov, J.O., Bonten, M.J.M. & Bootsma, M.C.J. (2012). Nosocomial transmission of community-associated methicillin-resistant Staphylococcus aureus in Danish Hospitals. Journal of Antimicrobial Chemotherapy, 67 (7), (pp. 1755-1780) (6 p.).
Gurieva, T., Bootsma, M.C.J. & Bonten, M.J.M. (2012). Reply to Lawes and Gould. Clinical Infectious Diseases, 55 (7), (pp. 1028-1029) (2 p.).
Gurieva, T., Bootsma, M.C.J. & Bonten, M.J.M. (2012). Successful Veterans Affairs initiative to prevent methicillin-resistant Staphylococcus aureus infections revisited. Clinical Infectious Diseases, 54 (11), (pp. 1618-1620) (3 p.).
  2011 - Wetenschappelijke publicaties
Hubben, Gijs, Bootsma, Martin, Luteijn, Michiel, Glynn, Diarmuid, Bishai, David, Bonten, Marc & Postma, Maarten (2011). Modelling the Costs and Effects of Selective and Universal Hospital Admission Screening for Methicillin-Resistant Staphylococcus aureus. PLoS ONE, Edited by Pieter H. M. van Baal, 6 (3).
de Smet, A.M.G.A., Kluytmans, J.A., Blok, H.E., Mascini, E.M., Benus, R.F., Bernards, A.T., Kuijper, E.J., Leverstein-van Hall, M.A., Jansz, A.R., de Jongh, B.M., van Asselt, G.J., Frenay, I.H., Thijsen, S.F., Conijn, S.N., Kaan, J.A., Arends, J.P., Sturm, P.D., Bootsma, M.C. & Bonten, M.J.M. (2011). Selective digestive tract decontamination and selective oropharyngeal decontamination and antibiotic resistance in patients in intensive-care units: an open-label, clustered group-randomised, crossover study. The Lancet Infectious Diseases, 11 (5), (pp. 372-380) (9 p.).
  2011 - Vakpublicaties
Bootsma, M.C. & Trapman, J.P. (2011). Infectieziekten benaderd vanuit een breed perspectief. Nieuw archief voor wiskunde. Serie 5, 12 (3), (pp. 185-186) (2 p.).
  2010 - Wetenschappelijke publicaties
Bootsma, M.C.J., Wassenberg, M.W.M., Trapman, J.P. & Bonten, M.J.M. (2010). The nosocomial transmission rate of animal-associated ST398 meticillin-resistant Staphylococcus aureus. Journal of the Royal Society Interface, 2010 (0349), (pp. 1-7) (7 p.).
van Mansfeld, R., Jongerden, I.P., Bootsma, M.C., Buiting, A., Bonten, M.J.M. & Willems, R.J.L. (2010). The population genetics of Pseudomonas aeruginosa isolates from different patient populations exhibits high-level host specificity. PLoS One, 5 (10), (pp. e13482) (7 p.).
van Mansfeld, Rosa, Jongerden, Irene, Bootsma, Martin, Buiting, Anton, Bonten, Marc & Willems, Rob (2010). The Population Genetics of Pseudomonas aeruginosa Isolates from Different Patient Populations Exhibits High-Level Host Specificity. PLoS ONE, Edited by Erika Martins Braga, 5 (10).
Wassenberg, M.W.M., Bootsma, M.C.J., Troelstra, A., Kluytmans, J.A.J.W. & Bonten, M.J.M. (2010). Transmissibility of livestock-associated methicillin-resistant Staphylococcus aureus (ST398) in Dutch hospitals. Clinical Microbiology and Infection, 17 (2), (pp. 316-319) (4 p.).
  2009 - Wetenschappelijke publicaties
Bootsma, M.C.J. (2009) Invited speaker Epidemics conference Asilomar, CA, USA (01-01-2009) Cost-effectiveness of different admission screening strategies to control the spread of methicillin-resistant Staphylococcus aureus
Bootsma, M.C.J. (2009) Invited speaker Epidemics conference Asilomar, CA, USA (01-01-2009) Detrimental effects of patient isolation in controlling methicillin-resistant Staphylococcus aureus transmissions due to increased workload
Bootsma, M.C.J. (16-05-2009) Invited speaker 19th. European Congress of Clinical Microbiology and Infectious Diseases Helsinki (16-01-2009) Dynamics of extended-spectrum beta-lactamases in Escherichia coli and Klebsiella pneumoniae: a mathematical model
Philipsen, K.R., Bootsma, M.C.J., Hall, M. Leverstein-Van, Stuart, J. Cohen & Bonten, M.J.M. (01-05-2009). Dynamics of extended-spectrum β-lactamases in Escherichia coli and Klebsiella pneumoniae: A mathematical model. Clinical Microbiology and Infection, 15, (pp. 158) (1 p.).
Bootsma, M.C.J. (10-05-2009) Invited speaker Conference of the Eastern Mediterranean Region of the International Biometric Society Istanbul, Turkije (10-01-2009) Parameter estimation for a discrete stochastic model of ESBL colonization in a human population
Bootsma, M.C.J. (2009) Invited speaker Epidemics conference Asilomar, CA, USA (01-01-2009) Quantitative analysis of different approaches to control methicillin-resistant Staphylococcus aureus in hospitals.
  2009 - Vakpublicaties
Bonten, M.J.M. & Bootsma, M.C.J. (2009). Nosocomial Transmission: Methacillin-Resistant Staphylococcus aureaus (MRSA). Modern Infectious Disease Epidemiology (pp. 395-407) (12 p.). Dordrecht: Springer.
  2008 - Wetenschappelijke publicaties
Bootsma, M.C.J. (01-12-2008) Invited speaker 2008 Epidemics conference Asilomar, CA, USA (01-01-2008) A birth-death model with detection to estimate nosocomial transmission rates of two methicillin-resistant Staphylococcus aureus strains
Trapman, Pieter & Bootsma, Martin (01-12-2008). A useful relationship between epidemiology and queueing theory. Mathematical Biosciences
Bootsma, M.C.J. (01-12-2008) Invited speaker 2008 Epidemics conference Asilomar, CA, USA (01-01-2008) Modeling the ban of fluoroquinolone use in the poultry industry on fluoroquinolone-resistance among Campylorbacter species
  2008 - Populariserende publicaties
Bootsma, M.C.J. (07-04-2008) Invited speaker SHEA Symposium Epidemiologic Methods (Orlando, Florida, USA) (07-01-2008) Estimating aquisition routes of antibiotic-resistant bacteria in hospital settings
  2007 - Wetenschappelijke publicaties
Bootsma, M.C., Bonten, M.J.M., Nijssen, S., Fluit, A.C. & Diekmann, O. (2007). An algorithm to estimate the importance of bacterial acquisition routes in hospital settings. American Journal of Epidemiology, 166 (7), (pp. 841-851) (11 p.).
Bootsma, Martin C. J. & Ferguson, Neil M. (01-05-2007). The effect of public health measures on the 1918 influenza pandemic in U.S. cities. Proceedings of the National Academy of Sciences of the United States of America, 104 (18), (pp. 7588-7593) (6 p.).
Bootsma, M.C.J. & Ferguson, N.M. (2007). The effect of public health measures on the 1918 influenza pandemic in US cities. Proceedings of the National Academy of Sciences of the United States of America, 104 (18), (pp. 7588-7593) (6 p.).
  2006 - Wetenschappelijke publicaties
Bootsma, M.C.J., Hota, B, Diekmann, O., Weinstein, R.A. & Bonten, M.J.M. (2006). A mathematical model to determine the growth rate of ca-mrsa and options for control. Abstract no: K-1680. of the 46th Interscience Conference on Antimicrobial Agents and Chemotherapy
Bootsma, M.C.J. & Diekmann, O. (2006). Comment on "linking population level models with growing networks: A class of epidemic models". Physical review. E, 74 (018101) (1 p.).
Bootsma, M.C.J., Diekmann, O. & Bonten, M.J.M. (2006). Controlling methicillin-resistant Staphylococcus aureus: quantifying the effects of interventions and rapid diagnostic testing. Proceedings of the National Academy of Sciences of the United States of America, 103 (14), (pp. 5620-5625) (6 p.).
  2005 - Wetenschappelijke publicaties
Bootsma, M.C., Bonten, M.J.M. & Diekmann, O. (2005). Estimating transmission parameters for infectious diseases in small hospital units. Design and Analysis of Infectious Disease Studies (pp. 2603-2603) (1 p.). Mathematisches Forschungsinstitut Oberwolfach Report.
Bootsma, M.C. (23-05-2005). Mathematical studies of the dynamics of antibiotic resistance.
Grundmann, H. & Bootsma, M.C. (2005). Predicting the succes of preventive measures in infection control using mathematical models. Nederlands Tijdschrift voor Medische Microbiologie, 13 (1), (pp. 14-16) (3 p.).
  2003 - Wetenschappelijke publicaties
Bonten, M.J.M., Kluytmans, J., de Smet, A.M., Bootsma, M.C. & Hoes, A.W. (2003). Selective decontamination of digestive tract in intensive care. The Lancet, 362 (20/27), (pp. 2118-2119) (2 p.).
Bonten, Marc J M, Kluytmans, Jan, de Smet, Anne Marie, Bootsma, Martin & Hoes, Arno (2003). Selective decontamination of digestive tract in intensive care. The Lancet, 362 (9401).
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Gegenereerd op 2018-09-21 12:00:05
Project:
RaDAR - Risk and Disease burden of Antimicrobial Resistance
01-01-2018 tot 31-12-2019
Algemene projectbeschrijving 

Antimicrobial resistance (AMR) is a growing European and global health problem in both humans and animals, leading to limited or poor treatment options for many diseases. Containment of AMR spread is part of the European Commission action plan against the rising threats from AMR. However, consensus estimates on actual exposure risk, sources, transmission routes and disease burden is scarce. A major reason for the lack of well-developed analyses might be the complexity of these approaches and their data requirements, and their interdisciplinary nature. Crucial to progression on this theme is the development of modelling methodology and the systematic integration of data. Currently much microbiological, molecular and epidemiological data is being gathered on AMR development, prevalence, spread, transmission, risks, etc. in the veterinary, food and human domain. However, assessment of the importance of different transmission routes and quantifying public health effects (i.e. disease burden) associated with AMR represent major knowledge gaps. In order to make full use of all available data, to check consistency, and to find consensus estimates, both problems (attribution and disease burden) require an integrated framework. In different WPs this project will generate genomic information to feed into transmission models (WP1), will establish estimates for the relation between antimicrobial use and the development of resistance (WP2), develop transmission models for AMR spread between and within animal and human population, establish risk assessment models to estimate the risk of spread through the food chain (WP3), and will construct a methodological framework for estimating the disease burden of AMR (WP5). The extreme diverse nature of the data available and generated in this project requires innovative methods to effectively integrate this data into final estimates for source attribution, risks and disease burden. To that end we will employ machine learning techniques (WP4) and Bayesian Evidence Synthesis (WP6). To this end innovative modelling techniques such as machine learning and Bayesian evidence synthesis will be employed. This project is expected to deliver harmonized modelling approaches and methodologies that are clearly beyond the state-of-the-art and will change the way of approaching the AMR problem to an integrative approach.

Rol: Uitvoerder Financiering
3e geldstroom - EU: One Health European Joint Programme - OHEJP (H2020-SC2). Duration: 24 months. Budget granted: € 2,279,502.00
Projectleden
Overige projectleden:
  • Eelco Franz (RIVM)
  • Tine Hald (DTU)
  • Aline de Koeijer (WBVR)
  • Thomas Sellhorst (BfR)
  • Christine Muller-Graf (BfR)
  • Annemarie Kaesbohrer (DfR)
  • Luca Busani (ISS)
  • Annalisa Pantosti (ISS)
  • Robin Simons (APHA)
  • Emma Snary (APHA)
  • Madelaine Norstrom (NVI)
  • Camilla Sekse (NVI)
  • Michel-Yves Mistou (ANSES)
  • Pascal Sanders (ANSES)
  • Sophie Granier (ANSES)

Gegenereerd op 2018-09-21 12:00:06
Volledige naam
dr. M.C.J. Bootsma Contactgegevens
Hans Freudenthalgebouw

Budapestlaan 6
Kamer 601
3584 CD  UTRECHT

Telefoonnummer direct 030 253 1530
Gegenereerd op 2018-09-21 12:00:06
Laatst bijgewerkt op 25-11-2013