dr. M. (Monique) Slijper
Gegenereerd op 2018-09-19 17:07:59

Alle publicaties
  2016 - Wetenschappelijke publicaties
Barasa, Benjamin A, van Oirschot, Brigitte A, Bianchi, Paola, van Solinge, Wouter W, Heck, Albert J R, van Wijk, Richard & Slijper, Monique (05-07-2016). Proteomics reveals reduced expression of transketolase in pyrimidine 5'-nucleotidase deficient patients. Proteomics - Clinical Applications This article is protected by copyright. All rights reserved..
  2014 - Wetenschappelijke publicaties
Barasa, B.A. & Slijper, M. (2014). Challenges for red blood cell biomarker discovery through proteomics. Biochimica et Biophysica Acta, 1844 (5), (pp. 1003–1010) (8 p.).
Binai, Nadine A, Bisschops, Markus M M, van Breukelen, Bas, Mohammed, Shabaz, Loeff, Luuk, Pronk, Jack T, Heck, Albert J R, Daran-Lapujade, Pascale & Slijper, Monique (01-08-2014). Proteome adaptation of Saccharomyces cerevisiae to severe calorie restriction in Retentostat cultures. Journal of Proteome Research, 13 (8), (pp. 3542-3553) (12 p.).
  2013 - Wetenschappelijke publicaties
Martens-de Kemp, S.R., Brink, Arjen, Stigter-van Walsum, M., Damen, J.M.A., Rustenburg, F., Wu, T., van Wieringen, W.N., Schuurhuis, G.J., Braakhuis, B.J.M., Slijper, M. & Brakenhoff, R.H. (2013). CD98 marks a subpopulation of head and neck squamous cell carcinoma cells with stem cell properties. Stem Cell Research, 10 (3), (pp. 477-488) (12 p.).
  2011 - Wetenschappelijke publicaties
Bleijerveld, O.B., Brakenhoff, R.H., Schaaij-Visser, B.M., Damen, J.M.A., Altelaar, A.F.M., Heck, A.J.R., Leemans, C.R. & Slijper, M. (2011). Protein signatures associated with tumor cell dissemination in head and neck cancer. Journal of Proteomics, 74 (4), (pp. 558-566) (9 p.).
Helbig, A.O., Daran-Lapujade, P., van Maris, A.J., de Hulster, E.A., de Ridder, D., Pronk, J.T., Heck, A.J.R. & Slijper, M. (2011). The diversity of protein turnover and abundance under nitrogen-limited steady-state conditions in Saccharomyces cerevisiae. Molecular BioSystems, 7 (12), (pp. 3313-3326) (14 p.).
  2010 - Wetenschappelijke publicaties
Jimenez, C.R. & Slijper, M. (2010). Current status of cancer proteomics, how far are we from clinical applications?. Journal of Proteomics, 73, (pp. 1787-1789) (3 p.).
Schaaij-Visser, B.M., Bremmer, J.F., Braakhuis, B.J.M., Heck, A.J.R., Slijper, M., van der Waal, I. & Brakenhoff, R.H. (2010). Evaluation of cornulin, keratin 4, keratin 13 expression and grade of dysplasia for predicting malignant progression of oral leukoplakia. Oral Oncology, 46, (pp. 123-127) (5 p.).
Helbig, A.O., Heck, A.J.R. & Slijper, M. (2010). Exploring the membrane proteome--challenges and analytical strategies. Journal of Proteomics, 73, (pp. 868-878) (11 p.).
Raymond, K., Richter, A., Kreft, M., Frijns, E., Janssen, H., Slijper, M., Praetzel-Wunder, S., Langbein, L. & Sonnenberg, A. (2010). Expression of the orphan protein Plet-1 during trichilemmal differentiation of anagen hair follicles. Journal of Investigative Dermatology, 130, (pp. 1500-1513) (14 p.).
Helbig, Andreas O., Rosati, Sara, Pijnappel, W W M Pim, van Breukelen, Bas, Timmers, H. Th Marc, Mohammed, Shabaz, Slijper, Monique & Heck, Albert J.R. (02-12-2010). Perturbation of the yeast N-acetyltransferase NatB induces elevation of protein phosphorylation levels. BMC Genomics, 11 (1).
Helbig, A.O., Rosati, S, Pijnappel, W.W.M., van Breukelen, B., Timmers, H.T.M., Mohammed, S., Slijper, M. & Heck, A.J.R. (2010). Perturbation of the yeast N-acetyltransferase NatB induces elevation of protein phosphorylation levels. BMC Genomics, 11, (pp. 685) (15 p.).
Helbig, A.O., Gauci, S., Raijmakers, R., van Breukelen, B., Slijper, M., Mohammed, S. & Heck, A.J.R. (2010). Profiling of N-acetylated protein termini provides in-depth insights into the N-terminal nature of the proteome. Molecular and Cellular Proteomics, 9, (pp. 928-939) (12 p.).
Schaaij-Visser, B.M., Brakenhoff, R.H., Leemans, C.R., Heck, A.J.R. & Slijper, M. (2010). Protein biomarker discovery for head and neck cancer. Journal of Proteomics, 73, (pp. 1790-1803) (14 p.).
van Gestel, R.A., van Solinge, W.W., van den Toorn, H.W.P., Rijksen, G., Heck, A.J.R., van Wijk, R. & Slijper, M. (2010). Quantitative erythrocyte membrane proteome analysis with Blue-native/SDS PAGE. Journal of Proteomics, 73, (pp. 456-465) (10 p.).
van Gestel, R.A., Rijken, P.J., Surinova, S., O'Flaherty, M., Heck, A.J.R., Killian, J.A., de Kroon, A.I.P.M. & Slijper, M. (2010). The influence of the acyl chain composition of cardiolipin on the stability of mitochondrial complexes; An unexpected effect of cardiolipin in α-ketoglutarate dehydrogenase and prohibitin complexes. Journal of Proteomics, 73 (4), (pp. 806-814) (9 p.). Cited By (since 1996): 1 Eighth International Conference on Teaching Statistics.
  2009 - Wetenschappelijke publicaties
Helbig, A.O., de Groot, M.J.L., van Gestel, R.A., Mohammed, S., Hulster, E.A.F., van Luttik, M.A.H., Daran-Lapujade, P., Pronk, J.T., Heck, A.J.R. & Slijper, M. (2009). A three-way proteomics strategy allows differential analysis of yeast mitochondrial membrane protein complexes under anaerobic and aerobic conditions. Proteomics (9), (pp. 4787-4798) (12 p.).
Schaaij-Visser, B.M., Brakenhoff, R.H., Jansen, J.W.A., O'Flaherty, M.C., Smeets, S.J., Heck, A.J.R. & Slijper, M. (2009). Comparative proteome analysis to explore p53 pathway disruption in head and neck carcinogenesis. Journal of Proteomics (72), (pp. 803-814) (12 p.).
Poot, A.J., van Ameijde, J., Slijper, M., van den Berg, J.H., Hilhorst, R., Ruijtenbeek, R., Rijkers, D.T.S. & Liskamp, R.M.J. (2009). Development of selective bisubstrate-based inhibitors against protein kinase C (PKC) isozymes by using dynamic peptide microarrays. ChemBioChem (10), (pp. 2042-2051) (10 p.).
Schaaij-Visser, B.M., Graveland, A.P., Gauci, S., Braakhuis, B.J.M., Buijze, M., Heck, A.J.R., Kuik, D.J., Bloemena, E., Leemans, C.R., Slijper, M. & Brakenhoff, R.H. (2009). Differential Proteomics Identifies Protein Biomarkers that predict local relapse of head and neck squamous cell carcinomas. Clinical Cancer Research (15), (pp. 7666-7675) (10 p.).
Alix-Panabieres, C., Vendrell, J-P, Slijper, M., Pelle, O., Barbotte, E., Mercier, G., Jacot, W., Fabbro, M & Pantel, K (2009). Full-length cytokeratin-19 is released by human tumor cells: a potential role in metastatic progression of breast cancer. Breast Cancer Research (11).
Gauci, S., Helbig, A.O., Slijper, M., Krijgsveld, J., Heck, A.J.R. & Mohammed, S. (2009). Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach. Analytical Chemistry (81), (pp. 4493-4501) (9 p.).
Gubbens, J., Ruijter, E., Fays, L.E.V., Damen, J.M.A., de Kruijff, B., Slijper, M., Rijkers, D.T.S., Liskamp, R.M.J. & de Kroon, A.I.P.M. (2009). Photocrosslinking and click chemistry enable the specific detection of proteins interacting with phospholipids at the membrane interface. Chemistry and Biology, 16, (pp. 3-14) (12 p.).
  2008 - Wetenschappelijke publicaties
Lemeer, S.M., Jopling, J.C., Gouw, J.W., Mohammed, S., Heck, A.J.R. & Slijper, M. (2008). Comparative phosphoproteomics of zebrafish Fyn/Yes morpholino knockdown embryos. Molecular and Cellular Proteomics, 7, (pp. 2176-2187) (12 p.).
Ringrose, J.H., van Solinge, W.W., Mohammed, S., O'Flaherty, M.C., van Wijk, H.A., Heck, A.J.R. & Slijper, M. (2008). Highly efficient depletion strategy for the two most abundant erythrocyte soluble proteins improves proteome coverage dramatically. Journal of Proteome Research, 7, (pp. 3060-3063) (4 p.).
Bovenschen, N., de Koning, P.J.A., Quadir, R., Broekhuizen, R., Damen, J.M.A., Froelich, CJ, Slijper, M. & Kummer, J.A. (2008). NK cell protease granzyme M targets alpha-tubulin and disorganizes the microtubule network. Journal of Immunology, 180 (12), (pp. 8184-8191) (7 p.).
Lemeer, S.M., Pinkse, M.W.H., Mohammed, S., van Breukelen, B., den Hertog, J., Slijper, M. & Heck, A.J.R. (2008). Online automated in vivo zebrafish phosphoproteomics: From large-scale analysis down to a single embryo. Journal of Proteome Research, 7 (4), (pp. 1555-1564) (10 p.). J PR 1st International Immunonutrition Workshop.
Gubbens, J., Slijper, M., de Kruijff, B. & de Kroon, A.I.P.M. (2008). Protein complexes in bacterial and yeast mitochondrial membranes differ in their sensitivity towards dissociation by SDS. Biochimica et Biophysica Acta, 1784 (12), (pp. 2012-2018) (7 p.).
  2007 - Wetenschappelijke publicaties
Lemeer, S.M., Ruijtenbeek, R., Pinkse, M.W.H., Jopling, J.C., Heck, A.J.R., den Hertog, J. & Slijper, M. (2007). Endogenous phosphotyrosine signaling in zebrafish embryos. Molecular and Cellular Proteomics
Gubbens, J, Vader, P., Damen, J.M.A., O'Flaherty, M.C., Slijper, M., de Kruijff, B. & de Kroon, A.I.P.M. (2007). Probing the membrane interface-interacting proteome using photactivatable lipid cross-linkers. Journal of Proteome Research, 6, (pp. 1951-1962) (12 p.).
Lemeer, S.M., Jopling, J.C., Ruijtenbeek, R., Slijper, M., Heck, A.J.R. & den Hertog, J. (2007). Protein-tyrosine kinase activity profiling in knock down zebrafish embryos. PLoS One, 7, (pp. e581) (1 p.).
Benschop, J.J., Mohammed, S., O'Flaherty, M.C., Heck, A.J.R., Slijper, M. & Menke, F.L.H. (2007). Quantitative phospho-proteomics of early elicitor signalling in Arabidopsis. Molecular and Cellular Proteomics, Feb 21 (E).
de Groot, M.J.L., Daran-Lapujade, P., van Breukelen, B., Knijnenburg, T.A., Hulster, E.A.F., Reinders, M.J.T., Pronk, J.T., Heck, A.J.R. & Slijper, M. (2007). Quantitative proteomics and transcriptomics of anaerobic and aerobic yeast cultures reveals post-transcriptional regulation of key cellular processes. Microbiology, 153, (pp. 3864-3878) (15 p.).
Yang, J., Groen, A.J., Lemeer, S.M., Jans, A., Slijper, M., Roe, S.M., den Hertog, J. & Barford, D. (2007). Reversible Oxidation of the Membrane Distal Domain of Receptor PTPα Is Mediated by a Cyclic Sulfenamide. Biochemistry, 46, (pp. 709-719) (11 p.).
Daran-Lapujade, P., Rossell, S., van Gulik, W.M., van Luttik, M.A.H., de Groot, M.J.L., Slijper, M., Heck, A.J.R., Daran, J-M, de Winde, J.H., Westerhoff, H.V., Pronk, J.T. & Bakker, B.M. (2007). The fluxes through glycolytic enzymes in S. cerevisiae are predominantly regulated at posttranscriptional levels. Proceedings of the National Academy of Sciences of the United States of America, 104 (40), (pp. 15753-15758) (6 p.).
  2006 - Wetenschappelijke publicaties
Dirksen, E.H.C., Cloos, J, Braakhuis, B.J.M., Brakenhoff, R.H., Heck, A.J.R. & Slijper, M. (2006). Human Lymphoblastoid proteome analysis reveals a role for the inhibitor of acetyltransferases complex in DNA double-strand break response. Cancer Research, 3, (pp. 1473-1480) (8 p.).
Dirksen, E.H.C., Pinkse, M.W.H., Rijkers, D.T.S., Cloos, J, Liskamp, R.M.J., Slijper, M. & Heck, A.J.R. (2006). Investigating the dynamic nature of the interactions between nuclear proteins and histones upon DNA damage using an immobilized peptide chemical proteomics approach. Journal of Proteome Research, 5, (pp. 2380-2388) (9 p.).
Kolkman, A., Daran-Lapujade, P., Fullaondo, A., Olsthoorn, M.M.A., Pronk, J.T., Slijper, M. & Heck, A.J.R. (2006). Proteome analysis of yeast response to various nutrient limitations. Molecular Systems Biology
Poot, A.J., Ruijter, E., Nuijens, T., Dirksen, E.H.C., Heck, A.J.R., Slijper, M., Rijkers, D.T.S. & Liskamp, R.M.J. (2006). Selective enrichment of Ser-/Thr-phosphorylated peptides in the presence of Ser-/Thr-glycosylated peptides. Proteomics, 6, (pp. 6394-6399) (6 p.).
  2005 - Wetenschappelijke publicaties
Ballell Pages, L., Alink, K.J., Slijper, M., Versluis, C., Liskamp, R.M.J. & Pieters, R.J. (2005). A new chemical probe for proteomics of carbohydrate-binding proteins. ChemBioChem, 6, (pp. 291-295) (5 p.).
Kolkman, A., Olsthoorn, M.M.A., Heeremans, C.E.M., Heck, A.J.R. & Slijper, M. (2005). Comparative Proteome Analysis of Saccharomyces cerevisiae grown in chemostat cultures limited for glucose or ethanol. Molecular and Cellular Proteomics, 4, (pp. 1-11) (11 p.).
Spelbrink, R.E.J., Kolkman, A., Slijper, M., Killian, J.A. & de Kruijff, B. (2005). Detection and identification of stable oligomeric protein complexes in Escherichia coli inner membranes. Journal of Biological Chemistry, 280, (pp. 28742-28748) (7 p.).
Kolkman, A., Slijper, M. & Heck, A.J.R. (2005). Development and application of proteomics technologies in Saccharomyces cerevisiae. Trends in Biotechnology, 23 (12), (pp. 598-604) (6 p.).
van der Veken, P., Dirksen, E.H.C., Ruijter, E., Elgersma, R.C., Heck, A.J.R., Rijkers, D.T.S., Slijper, M. & Liskamp, R.M.J. (2005). Development of a Novel Chemical Probe for the Selective Enrichment of Phosphorylated Serine- and Threonine-Containing Peptides. ChemBioChem, 6, (pp. 2271-2280) (9 p.).
Groen, A.J., Lemeer, S.M., van der Wijk, T., Overvoorde, J., Heck, A.J.R., Ostman, A., Barford, D., Slijper, M. & den Hertog, J. (2005). Differential Oxidation of Protein-tyrosine Phosphatases. Journal of Biological Chemistry, 280 (11), (pp. 10298-10304) (6 p.).
Kolkman, A., Dirksen, E.H.C., Slijper, M. & Heck, A.J.R. (2005). Double Standards in Quantitative Proteomics. Molecular and Cellular Proteomics, 4, (pp. 255-266) (11 p.).
Hermeling, S., Aranha, L.J., Damen, M., Slijper, M., Schellekens, H., Crommelin, D.J.A. & Jiskoot, W. (2005). Structural characterization and immunogenicity in wild-type and immune tolerant mice of degraded recombinant human interferon alpha2b. Pharmaceutical Research, 22, (pp. 1997-2006) (10 p.).
  2003 - Wetenschappelijke publicaties
Heijne, W.H.M., Stierum, R.H., Slijper, M., van Bladeren, P.J. & van Ommen, B. (2003). Toxicogenomics of bromobenzene hepatotoxicity: a combined transcriptomics and proteomics approch. Biochemical Pharmacology, 65, (pp. 857-875) (19 p.).
  1997 - Wetenschappelijke publicaties
Slijper, M., Boelens, R., Davis, A.L., Konings, R.N.H., Van Der Marel, G.A., Van Boom, J.H. & Kaptein, R. (07-01-1997). Backbone and side chain dynamics of lac repressor headpiece (1-56) and its complex with DNA. Biochemistry, 36 (1), (pp. 249-254) (6 p.).
  1996 - Wetenschappelijke publicaties
Spronk, C.A.E.M., Slijper, M., Van Boom, J.H., Kaptein, R. & Boelens, R. (08-09-1996). Formation of the hinge helix in the lac repressor is induced upon binding to the lac operator. Nature Structural Biology, 3 (11), (pp. 916-919) (4 p.).
Mulder, F A, Spronk, C A, Slijper, M, Kaptein, R & Boelens, R (1996). Improved HSQC experiments for the observation of exchange broadened signals. Journal of Biomolecular NMR, 8 (2), (pp. 223-8) (6 p.).
Kaptein, R, Slijper, M, Chuprina, VP, Rullmann, JAC, Knegtel, RMA & Boelens, R (1996). Protein-DNA interaction from NMR and Monte Carlo docking. NMR AS A STRUCTURAL TOOL FOR MACROMOLECULES (pp. 175-187) (13 p.).
Slijper, M, Bonvin, A M, Boelens, R & Kaptein, R (21-06-1996). Refined structure of lac repressor headpiece (1-56) determined by relaxation matrix calculations from 2D and 3D NOE data - change of tertiary structure upon binding to the lac operator. Journal of Molecular Biology, 259 (4), (pp. 761-73) (13 p.).
Slijper, M., Kaptein, R. & Boelens, R. (01-05-1996). Simultaneous 13C and 15N isotope editing of biomolecular complexes. Application to a mutant lac repressor headpiece DNA complex. Journal of Magnetic Resonance - Series B, 111 (2), (pp. 199-203) (5 p.).
  1995 - Wetenschappelijke publicaties
Kaptein, R., Boelens, R., Chuprina, V.P., Rullmann, J.A.C. & Slijper, M. (08-09-1995). [20] NMR and nucleic acid-protein interactions: The Lac repressor-operator system. Methods in Enzymology, 261, (pp. 513-524) (12 p.).
SLIJPER, M, Bonvin, Alexandre, BOELENS, R & KAPTEIN, R (1995). Application of structure refinement using 3D NOE-NOE spectroscopy to Lac Repressor Headpiece (1-56). Journal of Magnetic Resonance - Series B, 107 (3), (pp. 298-301).
van Geerestein-Ujah, E.C., Slijper, M., Boelens, R. & Kaptein, R. (01-07-1995). Graph-theoretical assignment of secondary structure in multidimensional protein NMR spectra: application to the lac repressor headpiece. Journal of Biomolecular NMR, 6 (1), (pp. 67-78) (12 p.).
Kaptein, R, Slijper, M & Boelens, R (1995). Structure and dynamics of the lac repressor-operator complex as determined by NMR. Toxicology Letters, 82-83, (pp. 591-9) (9 p.).
  1989 - Wetenschappelijke publicaties
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Gegenereerd op 2018-09-19 17:08:00
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dr. M. Slijper Contactgegevens
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Gegenereerd op 2018-09-19 17:08:00
Laatst bijgewerkt op 24-02-2015