2018

 

PUBLICATIONS 2018

 

 

Althuizen IHJ, Lee H, Sarneel JM and Vandvik V (2018)
Long-Term Climate Regime Modulates the Impact of Short-Term Climate Variability on Decomposition in Alpine Grassland Soils
Ecosystems, online: March 2018, https://doi.org/10.1007/s10021-018-0241-5

 

Bailey-Serres J, Pierik R, Ruban A & Wingler A (2018)
The dynamic plant: Capture, transformation and management of energy
Plant Physiology (2018) Feb;176(2):961-966. doi: 10.1104/pp.18.00041

 

Bongers FJ, Pierik R, Anten NPR & Evers JB (2018)
Subtle variation in shade avoidance responses may have profound consequences for plant competitiveness
Annals of Botany, 2018, https://doi.org/10.1093/aob/mcx151 Apr 18;121(5):863-873. doi: 10.1093/aob/mcx151

 

van Gelderen K*, Kang C*, Paalman R, Keuskamp DH, Hayes S and Pierik R (2018)
Far-red light detection in the shoot regulates lateral root development through HY5
The Plant Cell, 30: 101-116
* shared first authors

 

van Gelderen K*, Kang C* and Pierik R (2018) 
Light signaling, root development and plasticity
Plant Physiology, 176: 1049-1060.
* shared first authors

 

Gibbs DJ, Tedds HM,  Labandera AM, Bailey M, White MD, Hartman  S, Colleen Sprigg S,  Mogg SL,  Osborne R,  Dambire C, Boeckx T, Paling Z,  Voesenek LACJ, Flashman E & Michael J. Holdsworth (2018)
Oxygen-dependent proteolysis regulates the stability of angiosperm polycomb repressive complex 2 subunit VERNALIZATION 2
Nature Communication 9: 5438

 

Gommers CMM, Buti S, Tarkowská D, Pěnčík A, Banda JP, Arricastres V and Pierik R (2018)
Organ‐specific phytohormone synthesis in two Geranium species with antithetical responses to far‐red light enrichment
Plant Direct (9-6-2018) PDF

 

Hayes S, Pantazopoulou CK, Tween  AL, van Gelderen K, Reinen E, de Vries M, Prat S, Schuurink RC, Testerink C, Pierik R (2018).     
Soil salinity inhibits plant shade avoidance.
bioRxiv. DOI: 10.1101/289124

 

Küpers JJ, van Gelderen K and Pierik R (2018)
Location Matters: Canopy Light Responses over Spatial Scales
Trends in plant science (20-7-2018) 23: 865-873. https://doi.org/10.1016/j.tplants.2018.06.011

 

Maher KA, Bajic M, Kajala K, Reynoso MA, Pauluzzi G, West DA, Zumstein K, Woodhouse M, Bubb K, Dorrity M, Queitsch C, Bailey-Serres J, Sinha N, Brady SM and Deal R (2018)
Profiling of accessible chromatin regions across multiple plant species and cell types reveals common gene regulatory principles and new control modules
Plant Cell, 30: 15-36. http://www.plantcell.org/content/30/1/15

 

Mustroph A, Steffens B and Sasidharan R (2018)
Signaling interactions in flooding tolerance
Annual Plant Reviews DOI: https://doi.org/10.1104/pp.17.01232
 

Nilsson C, Riis T, Sarneel JM and Svavarsdottir K (2018)
Ecological Restoration as a Means of Managing Inland Flood Hazards
Bioscience Volume: 68, Issue: 2, Pages: 89-99
Published: February 2018

 

Polvi LE and Sarneel JM (2018)
Ecosystem engineers in rivers: An introduction to how and where organisms create positive biogeomorphic feedbacks
Wiley Interdisciplinary Reviews-Water, Volume: 5, Issue: 2, Article Number: e1271
Published: March-April 2018

 

Ravanbakhsh MR, Sasidharan R, Voesenek LACJ, Kowalchuk GA and Jousset A (2018)
Microbial modulation of plant ethylene signaling: ecological and evolutionary consequences
Microbiome 6: 52

 

Reed JW, Wua MF, Reevesa PH, Hodgensa C, Yadava V, Hayes S and Pierik R (2018)
Three auxin response factors control hypocotyl elongation
Plant Physiology, 178: 864-875

 

Reynoso MA, Pauluzzi GC, Cabanlit S, Velasco J, Bazin J, Deal R, Brady S, Sinha N, Bailey-Serres J and Kajala K (2018)
Isolation of Nuclei in Tagged Cell Types (INTACT), RNA Extraction and Ribosomal RNA Degradation to Prepare Material for RNA-Seq
Bio-protocol 8(7): e2458. DOI: 10.21769/BioProtoc.2458

 

Reynoso MA, Pauluzzi G, Kajala K, Cabanlit S, Velasco J, Bazin J, Deal R, Sinha N, Brady SM and Bailey-Serres J (2018) 
Nuclear transcriptomes at high resolution using retooled INTACT
Plant Physiol., 176: 270–281. http://www.plantphysiol.org/content/176/1/270

 

Sarneel JM, Hefting MM, Kowalchuk GA, Nilsson C, Van der Velder M, Visser EJW, Voesenek LACJ and Jansson R (2018)
Alternative transient states and slow plant community  responses after changed flooding regimes
Global Change Biology, DOI: 10.1111/gcb.14569

 

Sasidharan R, Hartman S, Liu Z, Martopawiro S, Sajeev N, van Veen H, Yeung E & Voesenek, LA (2018)
Signal dynamics and interactions during flooding stress
Plant physiology, 176(2), 1106-1117.

 

Toal TW, Ron M, Gibson D, Kajala K, Splitt B, Johnson LS, Miller ND, Slovak R, Gaudinier A, Patel R, de Lucas M, Provart NJ, Spalding EP, Busch W, Kliebenstein DJ, Brady SM (2018)
Regulation of Root Angle and Gravitropism
G3: Genes, Genomes, Genetics 8 (12), 3841-3855

 

Yeung E, van Veen H, Vashisht D, Sobral Paiva AL, Hummel M, Rankenberg T, Steffens B, Steffen-Heins A, Sauter M, de Vries M, Schuurink RC, Bazin J, Bailey-Serres J, Voesenek LACJ and Sasidharan R (2018)
A stress recovery signaling network for enhanced flooding tolerance in Arabidopsis thaliana
PNAS : https://doi.org/10.1073/pnas.1803841115

 

DISSERTATIONS 2018

 

Kang C, 7-5-2018
Light control of root system architecture

 

Pantazopoulou C, 14-2-2018
Mechanisms and consequences of neighbour detection in Arabidopsis thaliana

 

Yeung  EY, 19-2-2018
Molecular mechanisms mediating post-submergence recovery in Arabidopsis thaliana