Publications 2011

  • Alard,D., Dorland,E., Dupre,C., Stevens,C., Gaudnik,C., Corcket,E., Dise,N., Diekmann,M., Bobbink,R., Aarrestad,P., Vandvik,V. & Gowing,D. (2011) Impact of nitrogen deposition on species richness of calcareous grasslands in Europe - some preliminary results. Nitrogen Deposition and Natura 2000. Science and Practice in Determining Environmental Impacts (eds W. K. Hicks, C. P. Whitfield, W. J. Bealey & M. A. Sutton), pp. 115-162. Cost ESF, Brussels.
  • Anten,N.P.R.D.H.J. (2011) Is analyzing nitrogen-use efficiency at the plant canopy level a matter of choosing the right optimization criterion? Oecologia, 167, 293-303.
  • Anten,N.P.R.S.N.G. (2011) Ecophysiology of secondary succession in tropical moist forest: from individual traits to whole-plant performance. (ed T. D. B. L. FC Meinzer), pp. 429-455. Springer Verlag, New York.
  • Balcázar-Vargas,M.P., Peñuela-Mora,M.C., van Andel,T.R. & Zuidema,P.A. (2011) The Quest for a Suitable Host: Size Distributions of Host Trees and Secondary Hemiepiphytes Search Strategy. Biotropica, DOI: 10.1111/j.1744-7429.2011.00767.x.
  • Bollmann,A., French,E. & Laanbroek,H.J. (2011) Isolation, cultivation, and characterization of ammonia-oxidizing bacteria and archaea adapted to low ammonium concentrations. (ed M. G. Klotz), pp. 55-88.
  • Brederveld,R.J., Jaehnig,S.C., Lorenz,A.W., Brunzel,S. & Soons,M.B. (2011) Dispersal as a limiting factor in the colonization of restored mountain streams by plants and macroinvertebrates. Journal of Applied Ecology, 48, 1241-1250.
  • Couvreur,T.L.P., Pirie,M.D., Chatrou,L.W., Saunders,R.M.K., Su,Y., Richardson,J.E. & Erkens,R.H.J. (2011) Early evolutionary history of the flowering plant family Annonaceae: steady diversification and boreotropical geodispersal. Journal of Biogeography, 38, 664-680.
  • Crushell,P.H., Smolders,A.J.P., Schouten,M.G.C., Robroek,B.J.M., Van Wirdum,G. & Roelofs,J.G.M. (2011) Restoration of a Terrestrialized Soak Lake of an Irish Raised Bog: Results of Field Experiments. Restoration Ecology, 19, 261-272.
  • de Groot,G.A., During,H.J., Maas,J.W., Schneider,H., Vogel,J.C. & Erkens,R.H.J. (2011) Use of rbcL and trnL-F as a Two-Locus DNA Barcode for Identification of NW-European Ferns: An Ecological Perspective. Plos One, 6, e16371.
  • de Groot,G.A., Korpelainen,H., Wubs,E.R.J. & Erkens,R.H.J. (2011) Isolation of polymorphic microsatellite markers and tests of cross-amplification in four widespread European calcicole ferns. American Journal of Botany, 98, e319-e322.
  • Dingemans,B.J.J., Bakker,E.S. & Bodelier,P.L.E. (2011) Aquatic herbivores facilitate the emission of methane from wetlands. Ecology, 92, 1166-1173.
  • Elumeeva,T.G., Soudzilovskaia,N.A., During,H.J. & Cornelissen,J.H. (2011) The importance of colony structure versus shoot morphology for the water balance of 22 subarctic bryophyte species. Journal of Vegetation Science, 22, 152-164.
  • Erkens,R.H.J. (2011) What every chemist should know about plant names. Natural Product Reports, 28, 11-14.
  • Hajek,T., Ballance,S., Limpens,J., Zijlstra,M. & Verhoeven,J.T.A. (2011) Cell-wall polysaccharides play an important role in decay resistance of Sphagnum and actively depressed decomposition in vitro. Biogeochemistry, 103, 45-57.
  • Hoang,V.S., Baas,P., Kessler,P.J.A., Slik,J.W.F., Ter Steege,H. & Raes,N. (2011) Human and environmental influences on plant diversity and composition in Ben En National Park, Vietnam. Journal of Tropical Forest Science, 23, 328-337.
  • Hoorn,C., Wesselingh,F.P., Ter Steege,H., Bermudez,M.A., Mora,A., Sevink,J., Sanmartin,I., Sanchez-Meseguer,A., Anderson,C.L., Figueiredo,J.P., Jaramillo,C., Riff,D., Negri,F.R., Hooghiemstra,H., Lundberg,J., Stadler,T., Sarkinen,T. & Antonelli,A. (2011) In our review, we link the outstanding. Science, 331, 399-400.
  • Laanbroek,H.J. & Bollmann,A. (2011) Nitrification in inland waters. (eds B. B. Ward, D. J. Arp & M. G. Klotz), pp. 385-403. ASM Press, Washington DC.
  • Li,S.L., Yu,F.H., Werger,M.J.A., Dong,M. & Zuidema,P.A. (2011) Habitat-specific demography across dune fixation stages in a semi-arid sandland: Understanding the expansion, stabilization and decline of a dominant shrub. Journal of Ecology, 99, 610-620.
  • Maas,P.J.M., Westra,L.Y.T., Rainer,H., Lobão,A.Q. & Erkens,R.H.J. (2011) An updated index to genera, species, and infraspecific taxa of Neotropical Annonaceae. Nordic Journal of Botany, 29, 257-356.
  • Michel,P., Lee,W.G., During,H.J. & Cornelissen,J.H.C. (2011) Species traits and their non-additive interactions control the water economy of bryophyte cushions. Journal of Ecology, 100, 222-231.
  • Mota de Oliveira, S., Temme, A., Erkens, R.H.J., & ter Steege, H. (2011) Dispersal and connectivity of populations of Cheililejeunea rigidula (Lejeuneaceae) in Amazonian forests: a pilot study. Boletim do Instituto de Botânica 21:133-139. 
  • Nathan,R., Katul,G.G., Bohrer,G., Kuparinen,A., Soons,M.B., Thompson,S.E., Trakhtenbrot,A. & Horn,H.S. (2011) Mechanistic models of seed dispersal by wind.Theoretical Ecology, 4, 113-132.
  • Nordin,A., Sheppard,L.J., Strengbom,J., Bobbink,R., Gunnarsson,W.K., Hicks,W.K. & Sutton,M.A. (2011) Background document. New science on the effects of nitrogen deposition and concentrations on Natura 2000 sites (Theme 3). Nitrogen Deposition and Natura 2000. Science and Practice in Determining Environmental Impacts (eds W. K. Hicks, C. P. Whitfield, W. J. Bealey & M. A. Sutton), pp. 115-129. Cost ESF, Brussels.
  • Onoda,Y.A.N.P.R. (2011) Challenges to understand plant responses to wind. Plant Signal and Behaviour, 6 , 1057-1059.
  • Patiño,S., Fyllas,N.M., Baker,T.R., Paiva,R.Q., Quesada,C.A., Santos,A.J.B., Schwarz,M., Ter Steege,H., Phillips,O.L. & Lloyd,J. (2011) Coordination of physiological and structural traits in Amazon forest trees. Biogeosciences Discussion, 8, 5083-5158.
  • Puijalon,S.B.T.J.D.C.J.G.v.J.A.N.P.R.M.E.B.G. (2011) Plant resistance to mechanical stress: evidence of an avoidance - tolerance  trade-off. New Phytologist, 191, 1141-1149.
  • Rozendaal,D.M.A. & Zuidema,P.A. (2011) Dendroecology in the tropics: A review. Trees - Structure and Function, 25, 3-16.
  • Rozendaal,D.M.A., Soliz-Gamboa,C.C. & Zuidema,P.A. (2011) Assessing long-term changes in tropical forest dynamics: A first test using tree-ring analysis. Trees - Structure and Function, 25, 115-124.
  • Sarneel,J.M., Soons,M.B., Geurts,J.J., Beltman,B. & Verhoeven,J.T. (2011) Multiple effects of land-use changes impede the colonization of open water in fen ponds. Journal of Vegetation Science,  22, 551-563.
  • Soomers, H., Sarneel, J.M., Patberg, W., Verbeek, S.K., Verweij, P.A. & Van Diggelen, R. (2011). Factors influencing the seed source and sink functions of a floodplain nature reserve in the Netherlands. Journal of Vegetation Science, 22, 445-456.
  • Soliz-Gamboa,C.C., Rozendaal,D.M.A., Ceccantini,G., Angyalossy,V., van der Borg,K. & Zuidema,P.A. (2011) Evaluating the annual nature of juvenile rings in Bolivian tropical rainforest trees. Trees - Structure and Function, 25, 17-27.
  • Steenbergh,A.K., Bodelier,P.L.E., Hoogveld,H.L., Slomp,C.P. & Laanbroek,H.J. (2011) Phosphatases relieve carbon limitation of microbial activity in Baltic Sea sediments along a redox-gradient. Limnology and Oceanography, 56, 2018-2026.
  • Stevens,C., Dupre,C., Gaudnik,C., Dorland,E., Dise,N., Gowing,D., Bleeker,A., Alard,D., Bobbink,R., Fowler,D., Vandvik,V., Corcket,E., Mountford,J., Aarrestad,P.A., Muller,S. & Diekmann,M. (2011) Changes in species composition of European acid grasslands observed along a gradient of nitrogen deposition. Journal of Vegetation Science, 22, 207-215.
  • Stevens,C., Gowing,D., Wotherspoon,K., Alard,D., Aarrestad,P., Bleeker,A., Bobbink,R., Diekmann,M., Dise,N., Dupre,C., Dorland,E., Gaudnik,C., Rotthier,S., Soons,M. & Corcket,E. (2011) Addressing the Impact of Atmospheric Nitrogen Deposition on Western European Grasslands. Environmental Management, 48, 885-894.
  • Stevens,C.J., Dupre,C., Dorland,E., Gaudnik,C., Gowing,D.J., Bleeker,A., Diekmann,M., Alard,D., Bobbink,R., Fowler,D., Corcket,E., Mountford,J., Vandvik,V., Aarrestad,P.A., Muller,S. & Dise,N.B. (2011) The impact of nitrogen deposition on acid grasslands in the Atlantic region of Europe. Environmental Pollution, 159, 2243-2250.
  • Stevens,C.J., Manning,P., van den Berg,L.J., de Graaf,M.C., Wamelink,G., Boxman,A.W., Bleeker,A., Vergeer,P., rroniz-Crespo,M., Limpens,J., Lamers,L.P., Bobbink,R. & Dorland,E. (2011) Ecosystem responses to reduced and oxidised nitrogen inputs in European terrestrial habitats. Environmental Pollution, 159, 665-676.
  • Strengbom,J., Andersen,H.V., Adema,E.B., Aazem,K., Alard,K., Rotthier,S.L.F. & Bobbink,R. (2011) Working group report. New science on the effects of nitrogen deposition and concentrations on Natura 2000 sites (Theme 3). Nitrogen Deposition and Natura 2000. Science and Practice in Determining Environmental Impacts (eds W. K. Hicks, C. P. Whitfield, W. J. Bealey & M. A. Sutton), pp. 129-136. Cost ESF, Brussels.
  • Stropp,J., Sleen,P.V., Assunção,P.A., Silva,A.L. & Steege,H.T. (2011) Tree communities of white-sand and terra-firme forests of the upper Rio Negro. Acta Amazonica, 41, 521-544.
  • Suwa,Y., Norton,J.M., Bollmann,A., Klotz,M.G., Stein,L.Y., Laanbroek,H.J., Arp,D.J., Goodwin,L.A., Chertkov,O., Held,B., Bruce,D., Detter,J.C., Tapia,R. & Han,C.S. (2011) Genome Sequence of Nitrosomonas sp. Strain AL212, an Ammonia-Oxidizing Bacterium Sensitive to High Levels of Ammonia (vol 193, pg 5047, 2011). Journal of Bacteriology,193, 6112-6113.
  • Ter Steege,H., Haripersaud,P.P., Bánki,O.S. & Schieving,F. (2011) A model of botanical collectors' behavior in the field: Never the same species twice. American Journal of Botany, 98, 31-37.
  • Toledo,M., Poorter,L., Peña-Claros,M., Alarcón,A., Balcázar,J., Leaño,C., Licona,J.C., Llanque,O., Vroomans,V., Zuidema,P. & Bongers,F. (2011) Climate is a stronger driver of tree and forest growth rates than soil and disturbance. Journal of Ecology, 99, 405-413.
  • Toledo,M., Poorter,L., Peña-Claros,M., Alarcón,A., Balcazár,J., Chuviña,J., Leaño,C., Licona,J.C., Ter Steege,H. & Bongers,F. (2011) Patterns and Determinants of Floristic Variation across Lowland Forests of Bolivia. Biotropica, 43, 405-413.
  • Verhoeven,J.T.A., Beltman,B., Dorland,E., Robat,S. & Bobbink,R. (2011) Differential effects of ammonium and nitrate deposition on fen phanerogams and bryophytes. Applied Vegetation Science, 14, 149-157.
  • Visser,M.D., Jongejans,E., van Breugel,M., Zuidema,P.A., Chen,Y.Y., Rahman Kassim,A. & De Kroon,H. (2011) Strict mast fruiting for a tropical dipterocarp tree: A demographic cost-benefit analysis of delayed reproduction and seed predation. Journal of Ecology, 99, 1033-1044.
  • Wang,J.J., Vollrath,S., Behrends,T., Bodelier,P.L.E., Muyzer,G., Meima-Franke,M., Den Oudsten,F., Van Cappellen,P. & Laanbroek,H.J. (2011) Distribution and Diversity of Gallionella-Like Neutrophilic Iron Oxidizers in a Tidal Freshwater Marsh. Applied and Environmental Microbiology, 77, 2337-2344.
  • Wang,Z., Li,Y., During,H.J. & Li,L. (2011) Do clonal plants show greater division of labour morphologically and physiologically at higher patch contrasts? Plos One, 6, e25401.
  • Williams,C.D., Beltman,B., Moran,J., Sheehy Skeffington,M. & Gormally,M.J. (2011) Emperical support for the possible application of modified Ellenberg indices to the study of environmental gradients in dynamic Irish wetlands- evidence from Skealoghan turlough County Mayo. Biology and Environment Royal Irish Academy, 19-33.
  • Zuidema,P.A., Vlam,M. & Chien,P.D. (2011) Ages and long-term growth patterns of four threatened Vietnamese tree species. Trees - Structure and Function, 25, 29-33.

Professional publications

  • Beltman,B. & Kooiman,J. (2011) Groene snipper in een verstedelijkt landschap. Oud-utrecht, 84, 67.
  • Beltman,B., Barendregt,A., Beije,H.M. & Smits,N.A.C. (2011) Herstelstrategie H4010: Vochtige heiden (laagveen). (eds H. Van Dobben, A. J. M. Jansen & N. A. C. Smits), Alterra/Unie van Bosschappen, Wageningen.
  • Beltman,B., Barendregt,A., Kooijman,G., Smolders,F. & Ter Heerdt,G. (2011) Landschapsdoorsnede laagveenlandschap. (eds H. Van Dobben, A. J. M. Jansen & N. A. C. Smits), Alterra/Unie van Bosschappen, Wageningen.
  • Dorland,E., Bobbink,R., Soons,M.B. & Rotthier,S. (2011) Dalende stikstofdepositie is nog niet voldoende voor herstel van droge heischrale graslanden. De Levende Natuur, 112, 220-224.

Abstracts

  • Brouns, K., Hefting, M. M., and Verhoeven, J. T. A. Decomposition of peat in lab experiment simulating summer drought. poster abstract . 2011. 9-22-2011.
  • Brouns, K., Hefting, M. M., and Verhoeven, J. T. A. Effects of brackish water on the mineralisation of peat soils. Poster abstract 2011. 2-9-2011.
  • de Groot, Arjen, Heinjo During, Jan Maas, Harald Schneider, Johannes Vogel, and Roy Erkens. rbcL and trnL-F as a two-locus barcode for identification of ferns: new opportunities for studies of fern ecology.  2011. London, U.K. (Poster presentation), 55th Ecological Genetics Group Meeting.
  • de Groot, G. A., Baocheng Shen, H.J.During, and R.H.J.Erkens. Establishment of inter- and intraspecific diversity in ferns by means of long-distance dispersal.  2011. Utrecht, The Netherlands (Poster).
  • Erkens,R.H.J., Pirie,M.D., Chatrou,L.W., Saunders,R.M.K., Su,Y.C.F., Richardson,J.E. & Couvreur,T.L.P. (2011) Biogeographic histories within the flowering plant family Annonaceae: from steady diversification and boreotropical geodispersal to rapid speciation. 5th International conference of the International Biogeography Society, Heraklion, Greece (Poster).
  • Fraaije, R. G. A. Aquatic- and riparian vegetation colonization at innovatively restored lowland streams. Plant Population Biology Conference . 2011. Oxford.
  • Fraaije, R. G. A. Colonization by aquatic- and riparian vegetation along hydrologically restored lowland streams. Netherlands Annual Ecology Meeting . 2011. Lunteren.
  • Fraaije, R. G. A. Colonization by aquatic- and riparian vegetation along hydrologically restored lowland streams. Euromech colloquium 523.Ecohydraulics: linkages between hydraulics, morphodynamics and ecological processes in rivers . 2011. Clermont-Ferrand, France.
  • Garssen, A. G. Effects of climate change on colonization and biodiversity of European riparian plant communities. Netherlands Annual Ecology Meeting . 2011. Lunteren.
  • Garssen, A. G. Effects of climate change on colonization and biodiversity of European riparian plant communities. Plant Population Biology 2011 Conference . 2011. Oxford.
  • ter Steege, H. Beta-diversity in the Amazon. Bambi Seminar, invited presentation . 2011. STRI, BCI, Panama.
  • ter Steege, H. Tree diversity in the Amazon Current patterns - historical causes. Tupper Seminar, invited presentation . 2011. STRI, Panama city, Panama.