| PhD programme | Programme leader | Programme coordinator |
| Biomembranes | Bernd Helms | Esther de Graaff and Lena Will |
| Cancer, Stem Cells & Developmental Biology | Eric Kalkhoven | Aniek Janssen |
| Cardiovascular Research | Mathias Meine | Toon van Veen |
| Clinical & Experimental Neuroscience | Roger Adan | Geert Ramakers |
| Clinical & Translational Oncology | Onno Kranenburg | Sjoerd Elias |
| Computational Life Sciences | Berend Snel | Bram van Eijnatten |
| Drug Innovation | Olaf Klungel | Bas van Breukelen |
| Environmental Biology | Saskia van Wees | Pim Goossens |
| Epidemiology | Lotty Hooft | Kevin Jenniskens |
| Infection & Immunity | José Borghans | Erna van Wilsum |
| Life Sciences Education Research | Marieke van der Schaaf | Renske de Kleijn |
| Medical Imaging | Wilbert Bartels | Koen Vincken and Renée Allebrandi |
| Molecular Life Sciences | Friedrich Förster | Reinout Raijmakers |
| Regenerative Medicine | Debby Gawlitta | Ewart Kuijk |
| Toxicology & Environmental Health | Lidwien Smit | Mieke Lumens |
